Publikationsliste Dr. Holger Eubel
2026
Ditz, N., Brandt, D., Gasper, M., Röhricht, H., Hegermann, J., Wallbott, A., Eirich, J., Blum, N., Rugen, N., Niehaus, M., Martinez, M. D. P., Heinemann, B., Kühn, K., Maurino, V. G., Müller-Schüssele, S., Hildebrandt, T. M., Schwarzländer, M., Braun, H. P., Herde, M., ... Finkemeier, I. (2026). Seed mitochondria are equipped with cristae and a full proteome to kickstart germination. Current biology, 36(17), 4320-4339.e7. https://doi.org/10.1016/j.cub.2026.07.044
Dourmap, C., Baud, S., Eubel, H., Rugen, N., Crilat, É., Beradocco, S., Marnet, N., Clément, G., Tcherkez, G., Planchais, S., Cabassa, C., Lebreton, S., Bordenave-Jacquemin, M., Maldiney, R., Carol, P., Braun, H.-P., Masclaux-Daubresse, C., Bouchereau, A., Savouré, A., & Guivarc’h, A. (2026). Pyrroline-5-carboxylate dehydrogenase is a key player in nitrogen metabolism in maturing seeds of Arabidopsis thaliana. Journal of Experimental Botany, 77(6), 1827-1843. https://doi.org/10.1093/jxb/eraf542
Kwasniak-Owczarek, M., Przystajko, B., Tomal, A., Tran, H. C., Kazmierczak, U., Eubel, H., Ditz, N., Van Aken, O., & Janska, H. (2026). Dysregulated 3′-end processing of 18S pre-rRNA decreases mtPNPase efficiency in plant mitochondria. Nucleic acids research, 54(11), Artikel gkag609. https://doi.org/10.1093/nar/gkag609
2025
Ditz, N., Niehaus, M., Medina Escobar, N., Herde, M., & Eubel, H. (2025). Proteomic Analysis Infers Optimized ATP-Production in Guard Cell Mitochondria. Physiologia plantarum, 177(5), Artikel e70529. https://doi.org/10.1111/ppl.70529
2024
Ditz, N., Braun, H.-P., & Eubel, H. (2024). Protein assemblies in the Arabidopsis thaliana chloroplast compartment. Frontiers in Plant Science, 15, Artikel 1380969. https://doi.org/10.3389/fpls.2024.1380969
Zheng, Y., Cabassa-Hourton, C., Eubel, H., Chevreux, G., Lignieres, L., Crilat, E., Braun, H.-P., Lebreton, S., & Savouré, A. (2024). Pyrroline-5-carboxylate metabolism protein complex detected in Arabidopsis thaliana leaf mitochondria. Journal of experimental botany, 75(3), 917-934. https://doi.org/10.1093/jxb/erad406
2023
Kalvelage, J., Wöhlbrand, L., Schoon, R.-A., Zink, F.-M., Correll, C., Senkler, J., Eubel, H., Hoppenrath, M., Rhiel, E., Braun, H.-P., Winklhofer, M., Klingl, A., & Rabus, R. (2023). The enigmatic nucleus of the marine dinoflagellate Prorocentrum cordatum. MSPHERE, 8(4), e0003823. https://doi.org/10.1128/msphere.00038-23
2022
Brito, D. S., Quinhones, C. G. S., Neri-Silva, R., Heinemann, B., Schertl, P., Cavalcanti, J. H. F., Eubel, H., Hildebrandt, T., Nunes-Nesi, A., Braun, H.-P., & Araújo, W. L. (2022). The role of the electron-transfer flavoprotein: ubiquinone oxidoreductase following carbohydrate starvation in Arabidopsis cell cultures. Plant cell reports, 41(2), 431–446. https://doi.org/10.1007/s00299-021-02822-1
Schröder, L., Eubel, H., & Braun, H.-P. (2022). Complexome Profiling of Plant Mitochondrial Fractions. in O. Van Aken, & A. G. Rasmusson (Hrsg.), Plant Mitochondria: Methods and Protocols (S. 101-110). (Methods in Molecular Biology; Band 2363). Humana Press. https://doi.org/10.1007/978-1-0716-1653-6_9
2021
Heinemann, B., Künzler, P., Eubel, H., Braun, H.-P., & Hildebrandt, T. M. (2021). Estimating the number of protein molecules in a plant cell: protein and amino acid homeostasis during drought. Plant physiology, 185(2), 385-404. https://doi.org/10.1101/2020.03.17.995613, https://doi.org/10.1093/plphys/kiaa050
Jiang, Y., Wang, D., Yao, Y., Eubel, H., Künzler, P., Møller, I. M., & Xu, D. (2021). MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation. Computational and Structural Biotechnology Journal, 19, 4825-4839. https://doi.org/10.1016/j.csbj.2021.08.027
Rugen, N., Schaarschmidt, F., Eirich, J., Finkemeier, I., Braun, H.-P., & Eubel, H. (2021). Protein interaction patterns in Arabidopsis thaliana leaf mitochondria change in dependence to light. Biochimica et Biophysica Acta - Bioenergetics, 1862(8), Artikel 148443. https://doi.org/10.1016/j.bbabio.2021.148443
2020
Fuchs, P., Rugen, N., Carrie, C., Elsässer, M., Finkemeier, I., Giese, J., Hildebrandt, T. M., Kühn, K., Maurino, V. G., Ruberti, C., Schallenberg-Rüdinger, M., Steinbeck, J., Braun, H. P., Eubel, H., Meyer, E. H., Müller-Schüssele, S. J., & Schwarzländer, M. (2020). Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics. Plant Journal, 101(2), 420-441. https://doi.org/10.1111/tpj.14534, https://doi.org/10.15488/11679
Neubert, L., Borchert, P., Stark, H., Hoefer, A., Vogel-Claussen, J., Warnecke, G., Eubel, H., Kuenzler, P., Kreipe, H. H., Hoeper, M. M., Kuehnel, M., & Jonigk, D. (2020). Molecular Profiling of Vascular Remodeling in Chronic Pulmonary Disease. American Journal of Pathology, 190(7), 1382-1396. https://doi.org/10.1016/j.ajpath.2020.03.008
Niehaus, M., Straube, H., Künzler, P., Rugen, N., Hegermann, J., Giavalisco, P., Eubel, H., Witte, C. P., & Herde, M. (2020). Rapid Affinity Purification of Tagged Plant Mitochondria (Mito-AP) for Metabolome and Proteome Analyses. Plant physiology, 182(3), 1194-1210. https://doi.org/10.1104/PP.19.00736, https://doi.org/10.15488/17903
Schäfer, K., Künzler, P., Klingl, A., Eubel, H., & Carrie, C. (2020). The plant mitochondrial TAT pathway is essential for complex III biogenesis. Current Biology, 30(5), 840-853.e5. https://doi.org/10.1016/j.cub.2020.01.001, https://doi.org/10.1016/j.cub.2020.05.057
2019
Launay, A., Cabassa-Hourton, C., Eubel, H., Maldiney, R., Guivarc'h, A., Crilat, E., Planchais, S., Lacoste, J., Bordenave-Jacquemin, M., Clément, G., Richard, L., Carol, P., Braun, H. P., Lebreton, S., & Savouré, A. (2019). Proline oxidation fuels mitochondrial respiration during dark-induced leaf senescence in Arabidopsis thaliana. Journal of experimental botany, 70(21), 6203-6214. https://doi.org/10.1093/jxb/erz351
Rugen, N., Straube, H., Franken, L. E., Braun, H. P., & Eubel, H. (2019). Complexome Profiling Reveals Association of PPR Proteins with Ribosomes in the Mitochondria of Plants. Molecular and Cellular Proteomics, 18(7), 1345-1362. https://doi.org/10.1074/mcp.RA119.001396, https://doi.org/10.15488/11680, https://doi.org/10.15488/12222, https://doi.org/10.1074/mcp.AAC119.001674
2018
Senkler, J., Rugen, N., Eubel, H., Hegermann, J., & Braun, H. P. (2018). Absence of Complex I Implicates Rearrangement of the Respiratory Chain in European Mistletoe. Current biology, 28(10), 1606-1613.e4. https://doi.org/10.1016/j.cub.2018.03.050
Thal, B., Braun, H. P., & Eubel, H. (2018). Proteomic analysis dissects the impact of nodulation and biological nitrogen fixation on Vicia faba root nodule physiology. Plant molecular biology, 97(3), 233-251. https://doi.org/10.15488/11652, https://doi.org/10.1007/s11103-018-0736-7
