List of publications – Institute of Plant Genetics

Zheng, Y., Cabassa-Hourton, C., Eubel, H., Chevreux, G., Lignieres, L., Crilat, E., Braun, H-P., Lebreton, S., & Savouré, A. (2024). Pyrroline-5-carboxylate metabolism protein complex detected in Arabidopsis thaliana leaf mitochondria. Journal of experimental botany, 75(3), 917-934. Advance online publication. https://doi.org/10.1093/jxb/erad406

Kalvelage, J., Wöhlbrand, L., Schoon, R-A., Zink, F-M., Correll, C., Senkler, J., Eubel, H., Hoppenrath, M., Rhiel, E., Braun, H-P., Winklhofer, M., Klingl, A., & Rabus, R. (2023). The enigmatic nucleus of the marine dinoflagellate Prorocentrum cordatum. MSPHERE, 8(4), e0003823. Advance online publication. https://doi.org/10.1128/msphere.00038-23

Brito, D. S., Quinhones, C. G. S., Neri-Silva, R., Heinemann, B., Schertl, P., Cavalcanti, J. H. F., Eubel, H., Hildebrandt, T., Nunes-Nesi, A., Braun, H-P., & Araújo, W. L. (2022). The role of the electron-transfer flavoprotein: ubiquinone oxidoreductase following carbohydrate starvation in Arabidopsis cell cultures. Plant cell reports, 41(2), 431–446. Advance online publication. https://doi.org/10.1007/s00299-021-02822-1

Schröder, L., Eubel, H., & Braun, H-P. (2022). Complexome Profiling of Plant Mitochondrial Fractions. In O. Van Aken, & A. G. Rasmusson (Eds.), Plant Mitochondria: Methods and Protocols (pp. 101-110). (Methods in Molecular Biology; Vol. 2363). Humana Press. Advance online publication. https://doi.org/10.1007/978-1-0716-1653-6_9

Heinemann, B., Künzler, P., Eubel, H., Braun, H-P., & Hildebrandt, T. M. (2021). Estimating the number of protein molecules in a plant cell: protein and amino acid homeostasis during drought. Plant physiology, 185(2), 385-404. Advance online publication. https://doi.org/10.1101/2020.03.17.995613, https://doi.org/10.1093/plphys/kiaa050

Jiang, Y., Wang, D., Yao, Y., Eubel, H., Künzler, P., Møller, I. M., & Xu, D. (2021). MULocDeep: A deep-learning framework for protein subcellular and suborganellar localization prediction with residue-level interpretation. Computational and structural biotechnology journal, 19, 4825-4839. Advance online publication. https://doi.org/10.1016/j.csbj.2021.08.027

Rugen, N., Schaarschmidt, F., Eirich, J., Finkemeier, I., Braun, H-P., & Eubel, H. (2021). Protein interaction patterns in Arabidopsis thaliana leaf mitochondria change in dependence to light. Biochimica et Biophysica Acta - Bioenergetics, 1862(8), Article 148443. Advance online publication. https://doi.org/10.1016/j.bbabio.2021.148443

Fuchs, P., Rugen, N., Carrie, C., Elsässer, M., Finkemeier, I., Giese, J., Hildebrandt, T. M., Kühn, K., Maurino, V. G., Ruberti, C., Schallenberg-Rüdinger, M., Steinbeck, J., Braun, H. P., Eubel, H., Meyer, E. H., Müller-Schüssele, S. J., & Schwarzländer, M. (2020). Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics. Plant Journal, 101(2), 420-441. Advance online publication. https://doi.org/10.1111/tpj.14534, https://doi.org/10.15488/11679

Neubert, L., Borchert, P., Stark, H., Hoefer, A., Vogel-Claussen, J., Warnecke, G., Eubel, H., Kuenzler, P., Kreipe, H. H., Hoeper, M. M., Kuehnel, M., & Jonigk, D. (2020). Molecular Profiling of Vascular Remodeling in Chronic Pulmonary Disease. American Journal of Pathology, 190(7), 1382-1396. https://doi.org/10.1016/j.ajpath.2020.03.008

Niehaus, M., Straube, H., Künzler, P., Rugen, N., Hegermann, J., Giavalisco, P., Eubel, H., Witte, C. P., & Herde, M. (2020). Rapid Affinity Purification of Tagged Plant Mitochondria (Mito-AP) for Metabolome and Proteome Analyses. Plant physiology, 182(3), 1194-1210. Advance online publication. https://doi.org/10.1104/PP.19.00736

Schäfer, K., Künzler, P., Klingl, A., Eubel, H., & Carrie, C. (2020). The plant mitochondrial TAT pathway is essential for complex III biogenesis. Current Biology, 30(5), 840-853.e5. Advance online publication. https://doi.org/10.1016/j.cub.2020.01.001, https://doi.org/10.1016/j.cub.2020.05.057

Launay, A., Cabassa-Hourton, C., Eubel, H., Maldiney, R., Guivarc'h, A., Crilat, E., Planchais, S., Lacoste, J., Bordenave-Jacquemin, M., Clément, G., Richard, L., Carol, P., Braun, H. P., Lebreton, S., & Savouré, A. (2019). Proline oxidation fuels mitochondrial respiration during dark-induced leaf senescence in Arabidopsis thaliana. Journal of experimental botany, 70(21), 6203-6214. Advance online publication. https://doi.org/10.1093/jxb/erz351

Rugen, N., Straube, H., Franken, L. E., Braun, H. P., & Eubel, H. (2019). Complexome Profiling Reveals Association of PPR Proteins with Ribosomes in the Mitochondria of Plants. Molecular and Cellular Proteomics, 18(7), 1345-1362. Advance online publication. https://doi.org/10.1074/mcp.RA119.001396, https://doi.org/10.15488/11680, https://doi.org/10.15488/12222, https://doi.org/10.1074/mcp.AAC119.001674

Senkler, J., Rugen, N., Eubel, H., Hegermann, J., & Braun, H. P. (2018). Absence of Complex I Implicates Rearrangement of the Respiratory Chain in European Mistletoe. Current biology, 28(10), 1606-1613.e4. Advance online publication. https://doi.org/10.1016/j.cub.2018.03.050

Thal, B., Braun, H. P., & Eubel, H. (2018). Proteomic analysis dissects the impact of nodulation and biological nitrogen fixation on Vicia faba root nodule physiology. Plant molecular biology, 97(3), 233-251. Advance online publication. https://doi.org/10.15488/11652, https://doi.org/10.1007/s11103-018-0736-7

Cavalcanti, J. H. F., Quinhones, C. G. S., Schertl, P., Brito, D. S., Eubel, H., Hildebrandt, T., Nunes-Nesi, A., Braun, H. P., & Araújo, W. L. (2017). Differential impact of amino acids on OXPHOS system activity following carbohydrate starvation in Arabidopsis cell suspensions. Physiologia plantarum, 161(4), 451-467. https://doi.org/10.1111/ppl.12612

Petereit, J., Katayama, K., Lorenz, C., Ewert, L., Schertl, P., Kitsche, A., Wada, H., Frentzen, M., Braun, H. P., & Eubel, H. (2017). Cardiolipin Supports Respiratory Enzymes in Plants in Different Ways. Frontiers in Plant Science, 8(FEBRUARY), Article 72. https://doi.org/10.3389/fpls.2017.00072

Rao, R. S. P., Salvato, F., Thal, B., Eubel, H., Thelen, J. J., & Møller, I. M. (2017). The proteome of higher plant mitochondria. MITOCHONDRION, 33, 22-37. https://doi.org/10.1016/j.mito.2016.07.002

Schikowsky, C., Thal, B., Braun, H. P., & Eubel, H. (2017). Sample preparation for analysis of the plant mitochondrial membrane proteome. In Plant Membrane Proteomics (pp. 163-183). (Methods in Molecular Biology; Vol. 1696). Humana Press. https://doi.org/10.1007/978-1-4939-7411-5_11

Schroeder, R. Y., Zhu, A., Eubel, H., Dahncke, K., & Witte, C. P. (2017). The ribokinases of Arabidopsis thaliana and Saccharomyces cerevisiae are required for ribose recycling from nucleotide catabolism, which in plants is not essential to survive prolonged dark stress. New Phytologist, 217(1), 233-244. https://doi.org/10.1111/nph.14782

List of Publications Dr. Holger Eubel

2024

2023

2022

2021

2020

2019

2018

2017